PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_14870-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 214aa    MW: 23663.2 Da    PI: 10.0165
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_14870-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.4e-083281554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
              HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     ++e E+ RR++++   e+L +l+Pk + ++++  ++    L  A  YIk+L
  TRIUR3_14870-P1 32 KKESEKERRQHMKRLCEKLSSLIPKeD-NPHADTMTQLGSLDVAASYIKKL 81
                     6899*********************66.556666***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.2582781IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-53281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.23E-53285No hitNo description
Gene3DG3DSA:4.10.280.102.8E-123297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-103298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-43387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MEVKAKPARG GKRTRASSGT AGVPTAKVLM EKKESEKERR QHMKRLCEKL SSLIPKEDNP  60
HADTMTQLGS LDVAASYIKK LKERVDELQR KKTSAQAMAT LRRVSDISMP TTTITTSSGA  120
GSLEGDKYLD ASPTVVEVRQ PDDSSMEVRL ICSTEKPIKL HEVITIHEEE GADIVNANHS  180
VAGHKIFYTI HSRAFSIRIG IDVSRITERL RALV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17991KLKERVDELQRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-139HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565225.12e-71PREDICTED: uncharacterized protein LOC100830809
TrEMBLM7YGK31e-156M7YGK3_TRIUA; Uncharacterized protein
STRINGMLOC_17549.11e-124(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.12e-15bHLH family protein